| Agent | Sample Type |
|---|---|
| Bordetella bronchiseptica | TM Swab: Oral P / TM Swab: Lung |
| Bordetella hinzii | TM Swab: Oral P / TM Swab: Lung |
| Bordetella spp. | TM Swab: Oral P / TM Swab: Lung |
| Citrobacter rodentium | FF |
| Clostridium (renamed Clostridioides) difficile Toxin A/B | FF |
| Clostridium perfringens | FF |
| Corynebacterium bovis | TM Swab: Pelt |
| Corynebacterium kutscheri | TM Swab: Oral P or Genital / FF |
| Dermatophytes | Hair plucks / Skin Scrapings |
| Enterobacter spp. | FF |
| Enterococcus spp. | TM Swab: Oral P / FF |
| Escherichia coli | FF |
| Klebsiella spp. | FF |
| Klebsiella oxytoca | FF |
| Klebsiella pneumoniae | FF |
| Listeria monocytogenes | TM Swab: Oral P or Genital / FF |
| Pasteurellaceae spp. | TM Swab: Oral P |
| Pasteurella pneumotropica (renamed Rodentibacter heylii / pneumotropicus) | TM Swab: Oral P |
| Proteus spp. | FF |
| Pseudomonas aeruginosa | FF |
| Salmonella spp. | FF |
| Staphylococcus spp.(coag neg) | TM Swab: Oral P / FF |
| Staphylococcus aureus | TM Swab: Oral P / FF |
| Streptococcus pneumoniae (α-haem) | TM Swab: Oral P / FF |
| Streptococcus spp. (α-haem) | TM Swab: Oral P / FF |
| Streptococcus spp. (β-haem) | TM Swab: Oral P / FF |
| Yersinia pseudotuberculosis | FF |